View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: AFFX-BioB-3_at (Length: 298)
Name: AFFX-BioB-3_at
Description: affx|AFFX-BioB-3
Algorithm: BLASTX 7.5.1
Database: go-200510-seqdb; (91655 entries, 44081103 letters)
| [»] AFFX-BioB-3_at |
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| [»] TIGR_CMR|SO2740 (1 HSPs) |
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Alignment Details
Target: TIGR_CMR|SO2740 (Bit Score: 117; Significance: 5e-26; HSPs: 1)
Name: TIGR_CMR|SO2740
Description: SPTR:Q8EDK6 symbol:SO2740 "biotin synthase" [GO:0004076 "biotin synthase activity" evidence=ISS] [GO:0009102 "biotin biosynthesis" evidence=ISS] Pfam:PF04055 InterPro:IPR007197 InterPro:IPR006638 SMART:SM00729 InterPro:IPR010722 InterPro:IPR002684 Pfam:PF06968 PIRSF:PIRSF001619 TIGRFAMs:TIGR00433 EMBL:AE015713 HSSP:P12996 TIGR:SO2740 SPTR:Q8EDK6
Target: TIGR_CMR|SO2740; HSP #1
Raw Score: 291; E-Value: 5e-26
Query Start/End: Original strand, 2 - 295
Target Start/End: Original strand, 252 - 350
Alignment:
| Q |
2 |
VARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMTPDTD-EYYNAAAL |
295 |
Q |
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||||.|| | |||||||| |... ||||| |||||||||||||||||||| |. |||.||| |.| | . |.|| . | ..|.|||| |
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| T |
252 |
VARILMPLSRVRLSAGRENMSDELQAMCFFAGANSIFYGCKLLTTPNPEESDDMGLFRRLGLRPEQGAAASIDDEQAVLAKAAAYQDKASAQFYDAAAL |
350 |
T |
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