The prediction results for fifty-one TC families and seven TC classes in the seven model and four non-model organisms.


Class id
Class name		 Family size E.Coli S.cerevisiae D.melanogaster C.elegans A.thaliana O.sativa H.sapiens P. torridus H. profundum H. psychrophila H. fumigatus
Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent
1.A.1.9. Voltage-gated ion channel 6 0 0.00% 0 0.00% 10 0.63% 48 3.23% 0 0.00% 0 0.00% 14 0.78% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
1.A.10. Glutamate-gated ion channel of neurotransmitter receptors GIC 13 0 0.00% 0 0.00% 32 2.00% 11 0.74% 22 1.20% 22 1.04% 22 1.22% 0 0.00% 1 0.13% 0 0.00% 0 0.00%
1.A.33. Cation-channel-forming heat-shock protein 70 Hsp70 3 2 0.23% 14 2.41% 27 1.69% 13 0.87% 20 1.09% 34 1.61% 22 1.22% 1 0.52% 5 0.63% 1 0.23% 8 0.93%
1.A.5. Polycystin cation channel PCC 3 0 0.00% 0 0.00% 13 0.81% 7 0.47% 0 0.00% 0 0.00% 40 2.22% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
1.A.6. Epithelial Na+ channel ENaC 15 0 0.00% 0 0.00% 27 1.69% 34 2.28% 0 0.00% 0 0.00% 16 0.89% 0 0.00% 1 0.13% 0 0.00% 0 0.00%
1.A.8. Major intrinsic protein MIP 34 2 0.23% 4 0.69% 13 0.81% 12 0.81% 38 2.08% 42 1.98% 18 1.00% 0 0.00% 2 0.25% 0 0.00% 3 0.35%
1.A.9. Ligand-gated ion channel of neurotransmitter receptors LIC 22 0 0.00% 0 0.00% 43 2.69% 117 7.86% 0 0.00% 0 0.00% 54 3.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
1.C.12. Cholesterol-binding, thiol-activated cytolysin TAC 9 0 0.00% 0 0.00% 5 0.31% 67 4.50% 0 0.00% 0 0.00% 31 1.72% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
1.x Channels/pores 118 13.64% 43 7.39% 390 24.41% 539 36.22% 224 12.24% 237 11.19% 610 33.87% 5 2.59% 85 10.63% 32 7.24% 37 4.28%
2.A.1.1. Sugar porter SP 58 7 0.81% 33 5.67% 53 3.32% 23 1.55% 66 3.61% 69 3.26% 18 1.00% 18 9.33% 1 0.13% 0 0.00% 77 8.91%
2.A.1.14. The Anion:Cation Symporter (ACS) Family 19 7 0.81% 8 1.37% 35 2.19% 55 3.70% 9 0.49% 8 0.38% 7 0.39% 1 0.52% 0 0.00% 2 0.45% 34 3.94%
2.A.1.19. The Organic Cation Transporter (OCT) Family (The SLC22A family including OCT1-3, OCTN1-3 and OAT1-5 of H. sapiens) 16 0 0.00% 0 0.00% 36 2.25% 29 1.95% 6 0.33% 14 0.66% 20 1.11% 0 0.00% 0 0.00% 0 0.00% 2 0.23%
2.A.1.2. Drug:H+ antiporter-1 (12 transmembrane segments) DHA1 38 28 3.24% 17 2.92% 18 1.13% 24 1.61% 19 1.04% 29 1.37% 17 0.94% 16 8.29% 11 1.38% 5 1.13% 81 9.38%
2.A.1.3. Drug:H+ antiporter-2 (14 transmembane segments) DHA2 29 3 0.35% 7 1.20% 0 0.00% 1 0.07% 1 0.05% 0 0.00% 1 0.06% 8 4.15% 5 0.63% 3 0.68% 31 3.59%
2.A.17. Proton-dependent oligopeptide transporter POT 12 4 0.46% 1 0.17% 7 0.44% 3 0.20% 54 2.95% 99 4.67% 4 0.22% 0 0.00% 5 0.63% 0 0.00% 6 0.69%
2.A.18. Amino acid/auxin transporter (aka permease) AAAP 25 0 0.00% 7 1.20% 27 1.69% 11 0.74% 49 2.68% 57 2.69% 14 0.78% 0 0.00% 0 0.00% 0 0.00% 14 1.62%
2.A.22. Neurotransmitter,Na+ symporter NSS 26 0 0.00% 0 0.00% 38 2.38% 15 1.01% 0 0.00% 0 0.00% 20 1.11% 0 0.00% 3 0.38% 1 0.23% 0 0.00%
2.A.29. Mitochondrial carrier MC 65 0 0.00% 30 5.15% 77 4.82% 38 2.55% 64 3.50% 72 3.40% 61 3.39% 0 0.00% 0 0.00% 0 0.00% 37 4.28%
2.A.3.1. Amino acid transporter AAT 13 11 1.27% 0 0.00% 0 0.00% 1 0.07% 0 0.00% 0 0.00% 0 0.00% 7 3.63% 0 0.00% 2 0.45% 2 0.23%
2.A.3.10. Yeast amino acid transporter YAT 20 0 0.00% 18 3.09% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 1 0.52% 0 0.00% 0 0.00% 12 1.39%
2.A.3.4. Amino acid/choline transporter ACT 5 0 0.00% 4 0.69% 0 0.00% 0 0.00% 2 0.11% 8 0.38% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 20 2.31%
2.A.56. Tripartite ATP-independent periplasmic transporter TRAP-T 20 1 0.12% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 15 1.88% 17 3.85% 0 0.00%
2.A.66. Multi-antimicrobial extrusion factor MATE 38 5 0.58% 3 0.52% 1 0.06% 1 0.07% 54 2.95% 39 1.84% 3 0.17% 1 0.52% 10 1.25% 3 0.68% 2 0.23%
2.A.7.4. Plant drug/metabolite exporter P-DME 2 0 0.00% 0 0.00% 0 0.00% 0 0.00% 61 3.33% 62 2.93% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
2.x Secondary carriers 233 26.94% 213 36.60% 549 34.36% 454 30.51% 752 41.09% 886 41.83% 428 23.76% 75 38.86% 221 27.63% 112 25.34% 464 53.70%
3.A.1.1. Carbohydrate importer-1 CUT1 102 12 1.39% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 15 7.77% 10 1.25% 0 0.00% 0 0.00%
3.A.1.120. Drug resistance ATPase-1 Drug RA1 5 10 1.16% 8 1.37% 6 0.38% 5 0.34% 14 0.77% 21 0.99% 5 0.28% 4 2.07% 10 1.25% 8 1.81% 9 1.04%
3.A.1.2. Carbohydrate importer-2 CUT2 41 31 3.58% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 2 0.09% 0 0.00% 0 0.00% 20 2.50% 6 1.36% 0 0.00%
3.A.1.204. Eye pigment precuror transporter EPP 7 0 0.00% 2 0.34% 32 2.00% 10 0.67% 36 1.97% 38 1.79% 11 0.61% 0 0.00% 0 0.00% 0 0.00% 6 0.69%
3.A.1.3. Polar amino acid importer PAAT 60 24 2.77% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 24 3.00% 22 4.98% 0 0.00%
3.A.1.4. Hydrophobic amino acid importer HAAT 30 6 0.69% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 9 2.04% 0 0.00%
3.A.1.5. Peptide/opine/nickel importer PepT 74 35 4.05% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 14 7.25% 31 3.88% 14 3.17% 0 0.00%
3.A.15. The Outer Membrane Protein Secreting Main Terminal Branch (MTB) Family 24 3 0.35% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 17 2.13% 5 1.13% 0 0.00%
3.A.16. The Endoplasmic Reticular Retrotranslocon (ER-RT) Family 9 1 0.12% 21 3.61% 39 2.44% 38 2.55% 68 3.72% 76 3.59% 38 2.11% 1 0.52% 1 0.13% 1 0.23% 20 2.31%
3.A.18. The Nuclear mRNA Exporter (mRNA-E) Family 13 5 0.58% 25 4.30% 53 3.32% 49 3.29% 74 4.04% 98 4.63% 75 4.16% 1 0.52% 10 1.25% 5 1.13% 24 2.78%
3.A.2.1. H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase 28 8 0.92% 12 2.06% 10 0.63% 11 0.74% 10 0.55% 13 0.61% 9 0.50% 0 0.00% 16 2.00% 6 1.36% 7 0.81%
3.A.2.2. H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase 39 0 0.00% 15 2.58% 47 2.94% 25 1.68% 28 1.53% 24 1.13% 28 1.55% 0 0.00% 0 0.00% 0 0.00% 12 1.39%
3.A.6. Type III (virulence-related) secretory pathway IIISP 12 20 2.31% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 15 1.88% 8 1.81% 0 0.00%
3.A.7. Type IV (conjugal DNA-protein transfer) secretory pathway IVSP 142 2 0.23% 0 0.00% 0 0.00% 1 0.07% 2 0.11% 1 0.05% 1 0.06% 1 0.52% 10 1.25% 9 2.04% 0 0.00%
3.A.8. Mitochondrial protein translocating system (Tim-Tom) MPT 24 0 0.00% 28 4.81% 27 1.69% 13 0.87% 24 1.31% 26 1.23% 21 1.17% 0 0.00% 1 0.13% 1 0.23% 20 2.31%
3.A.9. Chloroplast protein translocating system (Tic-Toc) CEPT 10 0 0.00% 4 0.69% 3 0.19% 4 0.27% 32 1.75% 46 2.17% 5 0.28% 0 0.00% 0 0.00% 0 0.00% 11 1.27%
3.D.1. Proton-translocating NADH dehydrogenase NDH 81 23 2.66% 0 0.00% 15 0.94% 11 0.74% 10 0.55% 20 0.94% 12 0.67% 13 6.74% 0 0.00% 16 3.62% 7 0.81%
3.D.4.8. Proton-translocating cytochrome oxidase superfamily COX 15 0 0.00% 17 2.92% 5 0.31% 4 0.27% 4 0.22% 3 0.14% 3 0.17% 0 0.00% 1 0.13% 0 0.00% 8 0.93%
3.D.7. H2-heterodisulfide oxidoreductase HHO 7 4 0.46% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 1 0.13% 11 2.49% 0 0.00%
3.x Active transporters 319 36.88% 201 34.54% 407 25.47% 304 20.43% 491 26.83% 606 28.61% 400 22.21% 90 46.63% 323 40.38% 208 47.06% 207 23.96%
4.x Group translocators 45 5.20% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 29 3.63% 0 0.00% 0 0.00%
5.A.3. The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family 54 43 4.97% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 2 1.04% 26 3.25% 10 2.26% 1 0.12%
5.B.4. The Plant Photosystem I Supercomplex (PSI) Family 15 0 0.00% 0 0.00% 0 0.00% 0 0.00% 38 2.08% 43 2.03% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00%
5.x Electron carriers 45 5.20% 6 1.03% 11 0.69% 4 0.27% 61 3.33% 66 3.12% 15 0.83% 2 1.04% 29 3.63% 11 2.49% 7 0.81%
8.A.30. The Nedd4-Family Interacting Protein-2 (Nedd4) Family 2 0 0.00% 7 1.20% 47 2.94% 37 2.49% 37 2.02% 45 2.12% 86 4.78% 0 0.00% 0 0.00% 0 0.00% 8 0.93%
8.A.5. Voltage-gated K+ channel b-subunit VICb 3 6 0.69% 1 0.17% 4 0.25% 5 0.34% 6 0.33% 15 0.71% 7 0.39% 4 2.07% 1 0.13% 0 0.00% 7 0.81%
8.x Accessory factors 26 3.01% 20 3.44% 95 5.94% 67 4.50% 65 3.55% 91 4.30% 164 9.11% 8 4.15% 21 2.63% 12 2.71% 29 3.36%
9.A.14. Nuclear pore complex NPC 33 0 0.00% 42 7.22% 38 2.38% 33 2.22% 51 2.79% 34 1.61% 57 3.16% 0 0.00% 0 0.00% 0 0.00% 16 1.85%
9.A.34. The Putative Type VI Symbiosis/Virulence Secretory Pathway (VISP) Family 12 22 2.54% 2 0.34% 0 0.00% 0 0.00% 8 0.44% 14 0.66% 1 0.06% 0 0.00% 22 2.75% 24 5.43% 2 0.23%
9.A.5. Peroxisomal protein importer PPI 10 0 0.00% 18 3.09% 29 1.81% 17 1.14% 34 1.86% 35 1.65% 36 2.00% 0 0.00% 0 0.00% 0 0.00% 21 2.43%
9.B.17. The Putative Fatty Acid Transporter (FAT) Family 7 8 0.92% 10 1.72% 43 2.69% 31 2.08% 51 2.79% 54 2.55% 33 1.83% 5 2.59% 16 2.00% 8 1.81% 44 5.09%
9.B.32. The Putative Vectorial Glycosyl Polymerization (VGP) Family 4 5 0.58% 3 0.52% 0 0.00% 1 0.07% 5 0.27% 3 0.14% 3 0.17% 4 2.07% 6 0.75% 3 0.68% 2 0.23%
9.x Incompletely characterized 79 9.13% 99 17.01% 146 9.14% 120 8.06% 237 12.95% 232 10.95% 184 10.22% 13 6.74% 92 11.50% 67 15.16% 120 13.89%
Total 39.08% 62.03% 53.82% 54.10% 54.48% 55.05% 45.14% 60.62% 37.13% 45.25% 64.12%

 

The validated percentage for fifty-one families and TC classes in the eleven organisms.

Class id Class name Family size E coli S. cerevisa D. melanogaster C. elegans A. thaliana O. sativa H. sapiens P. torridus P. profundum D. psychrophila A. fumigatus average
Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent Num. Percent
1.A.1.9. Voltage-gated ion channel 6 0 0.00% 0 0.00% 8 80.00% 44 92.00% 0 0.00% 0 0.00% 14 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 91.67%
1.A.10. Glutamate-gated ion channel of neurotransmitter receptors GIC 13 0 0.00% 0 0.00% 26 81.00% 8 73.00% 21 95.00% 22 100.00% 22 100.00% 0 0.00% 1 100.00% 0 0.00% 0 0.00% 90.91%
1.A.33. Cation-channel-forming heat-shock protein 70 Hsp70 3 1 50.00% 1 7.00% 12 44.00% 1 8.00% 8 40.00% 21 62.00% 14 64.00% 0 0.00% 1 20.00% 0 0.00% 8 100.00% 45.58%
1.A.5. Polycystin cation channel PCC 3 0 0.00% 0 0.00% 2 15.00% 1 14.00% 0 0.00% 0 0.00% 9 23.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 20.00%
1.A.6. Epithelial Na+ channel ENaC 15 0 0.00% 0 0.00% 19 70.00% 18 53.00% 0 0.00% 0 0.00% 14 88.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 65.38%
1.A.8. Major intrinsic protein MIP 34 2 100.00% 4 100.00% 13 100.00% 7 58.00% 37 97.00% 42 100.00% 12 67.00% 0 0.00% 2 100.00% 0 0.00% 3 100.00% 91.04%
1.A.9. Ligand-gated ion channel of neurotransmitter receptors LIC 22 0 0.00% 0 0.00% 39 91.00% 81 69.00% 0 0.00% 0 0.00% 50 93.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 79.44%
1.C.12. Cholesterol-binding, thiol-activated cytolysin TAC 9 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0.00%
1.x Channels/pores 60 50.85% 18 41.86% 260 66.67% 308 57.14% 149 66.52% 158 66.67% 456 74.75% 3 60.00% 32 37.65% 12 37.50% 31 83.78% 58.49%
2.A.1.1. Sugar porter SP 58 7 100.00% 32 97.00% 48 91.00% 17 74.00% 66 100.00% 69 100.00% 18 100.00% 18 100.00% 1 100.00% 0 0.00% 77 100.00% 96.71%
2.A.1.14. The Anion:Cation Symporter (ACS) Family 19 7 100.00% 8 100.00% 34 97.00% 45 82.00% 9 100.00% 8 100.00% 5 71.00% 1 100.00% 0 0.00% 0 0.00% 32 94.00% 89.76%
2.A.1.19. The Organic Cation Transporter (OCT) Family (The SLC22A family including OCT1-3, OCTN1-3 and OAT1-5 of H. sapiens) 16 0 0.00% 0 0.00% 36 100.00% 22 76.00% 6 100.00% 14 100.00% 20 100.00% 0 0.00% 0 0.00% 0 0.00% 2 100.00% 93.46%
2.A.1.2. Drug:H+ antiporter-1 (12 transmembrane segments) DHA1 38 28 100.00% 17 100.00% 14 78.00% 18 75.00% 15 79.00% 28 97.00% 16 94.00% 16 100.00% 11 100.00% 5 100.00% 70 86.00% 89.81%
2.A.1.3. Drug:H+ antiporter-2 (14 transmembane segments) DHA2 29 3 100.00% 7 100.00% 0 0.00% 1 100.00% 1 100.00% 0 0.00% 1 100.00% 8 100.00% 5 100.00% 3 100.00% 28 90.00% 95.00%
2.A.17. Proton-dependent oligopeptide transporter POT 12 4 100.00% 1 100.00% 7 100.00% 3 100.00% 54 100.00% 98 99.00% 4 100.00% 0 0.00% 5 100.00% 0 0.00% 6 100.00% 99.45%
2.A.18. Amino acid/auxin transporter (aka permease) AAAP 25 0 0.00% 7 100.00% 27 100.00% 9 82.00% 49 100.00% 57 100.00% 14 100.00% 0 0.00% 0 0.00% 0 0.00% 14 100.00% 98.88%
2.A.22. Neurotransmitter,Na+ symporter NSS 26 0 0.00% 0 0.00% 37 97.00% 14 93.00% 0 0.00% 0 0.00% 18 90.00% 0 0.00% 3 100.00% 1 100.00% 0 0.00% 94.81%
2.A.29. Mitochondrial carrier MC 65 0 0.00% 28 93.00% 64 83.00% 34 89.00% 56 88.00% 70 97.00% 52 85.00% 0 0.00% 0 0.00% 0 0.00% 36 97.00% 89.71%
2.A.3.1. Amino acid transporter AAT 13 11 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 7 100.00% 0 0.00% 2 100.00% 2 100.00% 95.65%
2.A.3.10. Yeast amino acid transporter YAT 20 0 0.00% 18 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 1 100.00% 0 0.00% 0 0.00% 12 100.00% 100.00%
2.A.3.4. Amino acid/choline transporter ACT 5 0 0.00% 4 100.00% 0 0.00% 0 0.00% 2 100.00% 8 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 20 100.00% 100.00%
2.A.56. Tripartite ATP-independent periplasmic transporter TRAP-T 20 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 15 100.00% 17 100.00% 0 0.00% 96.97%
2.A.66. Multi-antimicrobial extrusion factor MATE 38 5 100.00% 3 100.00% 0 0.00% 0 0.00% 54 100.00% 39 100.00% 2 67.00% 1 100.00% 10 100.00% 3 100.00% 1 50.00% 96.72%
2.A.7.4. Plant drug/metabolite exporter P-DME 2 0 0.00% 0 0.00% 0 0.00% 0 0.00% 61 100.00% 59 95.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 97.56%
2.x Secondary carriers 218 93.56% 199 93.43% 485 88.34% 352 77.53% 699 92.95% 847 95.60% 378 88.32% 73 97.33% 209 94.57% 106 94.64% 429 92.46% 91.70%
3.A.1.1. Carbohydrate importer-1 CUT1 102 12 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 15 100.00% 10 100.00% 0 0.00% 0 0.00% 100.00%
3.A.1.120. Drug resistance ATPase-1 Drug RA1 5 8 80.00% 2 25.00% 0 0.00% 1 20.00% 6 43.00% 7 33.00% 0 0.00% 1 25.00% 10 100.00% 8 100.00% 1 11.00% 44.00%
3.A.1.2. Carbohydrate importer-2 CUT2 41 30 97.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 2 100.00% 0 0.00% 0 0.00% 19 95.00% 6 100.00% 0 0.00% 96.61%
3.A.1.204. Eye pigment precuror transporter EPP 7 0 0.00% 2 100.00% 32 100.00% 8 80.00% 36 100.00% 38 100.00% 11 100.00% 0 0.00% 0 0.00% 0 0.00% 6 100.00% 98.52%
3.A.1.3. Polar amino acid importer PAAT 60 24 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 24 100.00% 22 100.00% 0 0.00% 100.00%
3.A.1.4. Hydrophobic amino acid importer HAAT 30 6 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 9 100.00% 0 0.00% 100.00%
3.A.1.5. Peptide/opine/nickel importer PepT 74 35 100.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 14 100.00% 31 100.00% 14 100.00% 0 0.00% 100.00%
3.A.15. The Outer Membrane Protein Secreting Main Terminal Branch (MTB) Family 24 1 33.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 4.00%
3.A.16. The Endoplasmic Reticular Retrotranslocon (ER-RT) Family 9 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 1 3.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0.33%
3.A.18. The Nuclear mRNA Exporter (mRNA-E) Family 13 0 0.00% 0 0.00% 0 0.00% 2 4.00% 0 0.00% 1 1.00% 15 20.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 4.30%
3.A.2.1. H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase 28 8 100.00% 9 75.00% 10 100.00% 7 64.00% 8 80.00% 12 92.00% 8 89.00% 0 0.00% 16 100.00% 6 100.00% 7 100.00% 89.22%
3.A.2.2. H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase 39 0 0.00% 12 80.00% 47 100.00% 16 64.00% 28 100.00% 21 88.00% 28 100.00% 0 0.00% 0 0.00% 0 0.00% 12 100.00% 91.62%
3.A.6. Type III (virulence-related) secretory pathway IIISP 12 4 20.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 9.30%
3.A.7. Type IV (conjugal DNA-protein transfer) secretory pathway IVSP 142 1 50.00% 0 0.00% 0 0.00% 0 0.00% 2 100.00% 1 100.00% 0 0.00% 0 0.00% 5 50.00% 7 78.00% 0 0.00% 59.26%
3.A.8. Mitochondrial protein translocating system (Tim-Tom) MPT 24 0 0.00% 18 64.00% 10 37.00% 2 15.00% 3 12.00% 11 42.00% 10 48.00% 0 0.00% 0 0.00% 0 0.00% 13 65.00% 41.61%
3.A.9. Chloroplast protein translocating system (Tic-Toc) CEPT 10 0 0.00% 0 0.00% 2 67.00% 0 0.00% 1 3.00% 13 28.00% 1 20.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 16.19%
3.D.1. Proton-translocating NADH dehydrogenase NDH 81 15 65.00% 0 0.00% 3 20.00% 6 55.00% 9 90.00% 9 45.00% 12 100.00% 10 77.00% 0 0.00% 9 56.00% 6 86.00% 62.20%
3.D.4.8. Proton-translocating cytochrome oxidase superfamily COX 15 0 0.00% 13 76.00% 0 0.00% 0 0.00% 2 50.00% 2 67.00% 2 67.00% 0 0.00% 1 100.00% 0 0.00% 5 62.00% 55.56%
3.D.7. H2-heterodisulfide oxidoreductase HHO 7 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0.00%
3.x Active transporters 257 80.56% 105 52.24% 224 55.04% 113 37.17% 242 49.29% 303 50.00% 228 57.00% 72 80.00% 248 76.78% 152 73.08% 116 56.04% 60.65%
4.x Group translocators 45 100.00% 0 N/A 0 N/A 0 N/A 0 N/A 0 N/A 0 N/A 0 N/A 29 N/A 0 N/A 0 N/A N/A
5.A.3. The Prokaryotic Molybdopterin-containing Oxidoreductase (PMO) Family 54 8 19.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 2 20.00% 0 0.00% 12.20%
5.B.4. The Plant Photosystem I Supercomplex (PSI) Family 15 0 0.00% 0 0.00% 0 0.00% 0 0.00% 38 100.00% 16 37.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 66.67%
5.x Electron carriers 8 17.78% 0 0.00% 2 18.18% 0 0.00% 42 68.85% 35 53.03% 13 86.67% 0 0.00% 0 0.00% 2 18.18% 1 14.29% 25.18%
8.A.30. The Nedd4-Family Interacting Protein-2 (Nedd4) Family 2 0 0.00% 0 0.00% 4 9.00% 0 0.00% 0 0.00% 0 0.00% 15 17.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 7.12%
8.A.5. Voltage-gated K+ channel b-subunit VICb 3 0 0.00% 0 0.00% 0 0.00% 0 0.00% 1 17.00% 1 7.00% 6 86.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 14.29%
8.x Accessory factors 2 7.69% 0 0.00% 11 11.58% 13 19.40% 1 1.54% 4 4.40% 76 46.34% 1 12.50% 2 9.52% 1 8.33% 0 0.00% 11.03%
9.A.14. Nuclear pore complex NPC 33 0 0.00% 0 0.00% 0 0.00% 6 18.00% 0 0.00% 0 0.00% 4 7.00% 0 0.00% 0 0.00% 0 0.00% 6 38.00% 5.90%
9.A.34. The Putative Type VI Symbiosis/Virulence Secretory Pathway (VISP) Family 12 1 5.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 0 0.00% 2 9.00% 0 0.00% 0 0.00% 3.16%
9.A.5. Peroxisomal protein importer PPI 10 0 0.00% 0 0.00% 6 21.00% 0 0.00% 0 0.00% 4 11.00% 8 22.00% 0 0.00% 0 0.00% 0 0.00% 3 14.00% 11.05%
9.B.17. The Putative Fatty Acid Transporter (FAT) Family 7 1 12.00% 2 20.00% 2 5.00% 3 10.00% 7 14.00% 0 0.00% 17 52.00% 1 20.00% 5 31.00% 2 25.00% 2 5.00% 13.86%
9.B.32. The Putative Vectorial Glycosyl Polymerization (VGP) Family 4 1 20.00% 0 0.00% 0 0.00% 0 0.00% 4 80.00% 3 100.00% 0 0.00% 3 75.00% 3 50.00% 2 67.00% 0 0.00% 45.71%
9.x Incompletely characterized 13 16.46% 5 5.05% 9 6.16% 11 9.17% 13 5.49% 18 7.76% 35 19.02% 6 46.15% 20 21.74% 11 16.42% 17 14.17% 15.23%