Current Version: V2 (July 2009)
# of Experiments: 64
# of GeneChips: 156
Quick Search:# of Experiments: 64
# of GeneChips: 156
MtGEA:
Home / Introduction
Microarray Sample Selection
Multi-transcript Viewer
Search by...
- Probeset ID
- Homolog Probeset ID
- Gene Annotation...
- Sequence Alignment (BLAST)
- Genomics Features (Genome Browser)
Subscribe to Our Mailing List
and be updated with our project progress, new data release
and new functions provided at our database server (low email traffic):
External Links:- Mt Gene Expression Atlas Data at ArrayExpress
- Mt Gene Expression Atlas Data at PLEXdb
- Mt probeset-gene mapping
- MedicCyc, Mt biological pathways
- KEGG annotation of Affymetrix Medicago chip
- Center for Medicago Genomics Research of the Noble Foundation
- The Medicago truncatula Handbook
- Medicago.org
- Download flash player (required for visualizing gene expression profiles)
Affymetrix Medicago GeneChip Probeset Naming Rules
ID starting with...
- AFFX_ : Affymetrix control probesets
- Mtr. : Probeset based on sequences in Medicago truncatula
- Msa. : Probeset based on sequences in Medicago sativa
- Sme. : Probeset based on sequences in Sinorhizobium meliloti
ID ending with...
- _at : Anti-sense target
- _st : Sense target (controls)
- _s_at : Probeset shares common probes among multiple transcripts (originated from multiple genes)
- _a_at : Gene may code for alternatively-spliced transcripts
- _x_at : It was not possible to design unique probes for multiple transcripts (this probeset is not unique for the gene)
© by The Samuel Roberts Noble Foundation, Inc.